Campylobacter_D jejuni
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
NCBI Strain Identifiers 2871
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.28%
CheckM Contamination 0.24%
CheckM Strain Heterogeneity 66.67
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 31
N50 Contigs 180,958 bp
Longest Contig 285,658 bp
Scaffold Count 30
N50 Scaffolds 180,958 bp
Longest Scaffold 285,658 bp
Genome Size 1,654,176 bp
Protein Count 1,733
Coding Density 93.96%
GC Percentage 30.44%
Ambiguous Bases 4
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM142045v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04159299
Country Malaysia: Selangor
Date 2015-10-29
Genbank Assembly Accession GCA_001420455.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,723
Refseq Category na
Seq Rel Date 2015/10/29
Spanned Gaps 1
Species Taxid 197
SSU Count 1
Submitter Monash University
Taxid 197
Total Gap Length 61
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LLWN00000000.1