Campylobacter_D jejuni
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni; x__Campylobacter jejuni CVM 41964
NCBI Strain Identifiers CVM 41964
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 20.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 102
N50 Contigs 74,691 bp
Longest Contig 340,727 bp
Scaffold Count 102
N50 Scaffolds 74,691 bp
Longest Scaffold 340,727 bp
Genome Size 1,720,282 bp
Protein Count 1,839
Coding Density 94.18%
GC Percentage 30.45%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Campylobacter jejuni CVM 41964 v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02887143
Country USA
Date 2015-10-29
Genbank Assembly Accession GCA_001419625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source clinical
Latitude Longitude None
Molecule Count N/A
CDS Count 1,822
Refseq Category na
Seq Rel Date 2015/10/29
Spanned Gaps 0
Species Taxid 197
SSU Count 1
Submitter FDA/CVM
Taxid 1440062
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JAKR00000000.1