Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio fluvialis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio fluvialis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio fluvialis
NCBI Strain Identifiers S1110
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001558415.2)
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 0.71%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 252
N50 Contigs 50,649 bp
Longest Contig 143,597 bp
Scaffold Count 252
N50 Scaffolds 50,649 bp
Longest Scaffold 143,597 bp
Genome Size 4,524,163 bp
Protein Count 4,278
Coding Density 88.30%
GC Percentage 49.96%
Ambiguous Bases N/A
GTDB representative GCA_001558415.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM141870v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04009994
Country Pacific Ocean: Guinea
Date 2015-10-28
Genbank Assembly Accession GCA_001418705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Seawater
Latitude Longitude None
Molecule Count N/A
CDS Count 4,222
Refseq Category na
Seq Rel Date 2015/10/28
Spanned Gaps 0
Species Taxid 676
SSU Count 1
Submitter Technical University of Denmark
Taxid 676
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKHR00000000.1