Apibacter mensalis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Weeksellaceae; g__Apibacter; s__Apibacter mensalis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Apibacter; s__Apibacter mensalis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Apibacter; s__Apibacter mensalis
NCBI Strain Identifiers R-53146
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 48
N50 Contigs 158,456 bp
Longest Contig 308,349 bp
Scaffold Count 42
N50 Scaffolds 183,104 bp
Longest Scaffold 308,349 bp
Genome Size 2,331,098 bp
Protein Count 2,121
Coding Density 86.39%
GC Percentage 30.48%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM141868v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03992719
Country None
Date 2015-10-28
Genbank Assembly Accession GCA_001418685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,052
Refseq Category representative genome
Seq Rel Date 2015/10/28
Spanned Gaps 6
Species Taxid 1586267
SSU Count 3
Submitter Joint Genome Institute
Taxid 1586267
Total Gap Length 5012
Translation Table 11
tRNA Count (total) 38
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LIVM00000000.1