Streptomyces neyagawaensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces neyagawaensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces neyagawaensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces neyagawaensis
NCBI Strain Identifiers NRRL B-3092
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 95.66%
CheckM Contamination 1.77%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1,456
N50 Contigs 10,011 bp
Longest Contig 67,537 bp
Scaffold Count 1,411
N50 Scaffolds 10,145 bp
Longest Scaffold 67,537 bp
Genome Size 9,132,025 bp
Protein Count 8,731
Coding Density 87.23%
GC Percentage 71.11%
Ambiguous Bases 132
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM141864v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04004083
Country Japan: Osaka
Date 2015-10-28
Genbank Assembly Accession GCA_001418645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 8,611
Refseq Category na
Seq Rel Date 2015/10/28
Spanned Gaps 45
Species Taxid 42238
SSU Count 1
Submitter USDA/ARS/NCAUR
Taxid 42238
Total Gap Length 1773
Translation Table 11
tRNA Count (total) 61
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LIQW00000000.1