Streptomyces aurantiacus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces aurantiacus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces aurantiacus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces aurantiacus
NCBI Strain Identifiers NRRL ISP-5412
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 96.46%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 612
N50 Contigs 28,924 bp
Longest Contig 151,890 bp
Scaffold Count 561
N50 Scaffolds 29,280 bp
Longest Scaffold 151,890 bp
Genome Size 9,255,252 bp
Protein Count 8,312
Coding Density 87.33%
GC Percentage 70.24%
Ambiguous Bases 171
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM141833v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04002962
Country Russia
Date 2015-10-28
Genbank Assembly Accession GCA_001418335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 8,319
Refseq Category representative genome
Seq Rel Date 2015/10/28
Spanned Gaps 51
Species Taxid 47760
SSU Count 4
Submitter USDA/ARS/NCAUR
Taxid 47760
Total Gap Length 2218
Translation Table 11
tRNA Count (total) 60
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LIPP00000000.1