Mycobacterium gordonae_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium gordonae_B
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium gordonae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium gordonae
NCBI Strain Identifiers CTRI 14-8773
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 2.34%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 377
N50 Contigs 61,403 bp
Longest Contig 455,117 bp
Scaffold Count 377
N50 Scaffolds 61,403 bp
Longest Scaffold 455,117 bp
Genome Size 7,552,315 bp
Protein Count 7,044
Coding Density 91.26%
GC Percentage 66.80%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM141795v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04123344
Country Russia
Date 2015-10-28
Genbank Assembly Accession GCA_001417955.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sputum of patient with mycobacteriosis
Latitude Longitude 54.70649 N 20.51094999999998 E
Molecule Count N/A
CDS Count 7,042
Refseq Category na
Seq Rel Date 2015/10/28
Spanned Gaps 0
Species Taxid 1778
SSU Count 1
Submitter Common use center "Biotechnology" of All-Russian Scientific Research Institute of Agricultural Biotechnology
Taxid 1778
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKTM00000000.1