Xylella fastidiosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xylella; s__Xylella fastidiosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xylella; s__Xylella fastidiosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xylella; s__Xylella fastidiosa
NCBI Strain Identifiers CO33
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000767565.1)
Genome Characteristics
CheckM Completeness 99.28%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 96
N50 Contigs 176,135 bp
Longest Contig 406,234 bp
Scaffold Count 96
N50 Scaffolds 176,135 bp
Longest Scaffold 406,234 bp
Genome Size 2,681,926 bp
Protein Count 2,649
Coding Density 81.96%
GC Percentage 51.70%
Ambiguous Bases 42
GTDB representative GCA_000767565.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM141792v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04100274
Country None
Date 2015-10-28
Genbank Assembly Accession GCA_001417925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,554
Refseq Category na
Seq Rel Date 2015/10/28
Spanned Gaps 0
Species Taxid 2371
SSU Count 2
Submitter National Research Council (C.N.R.), Institute for Sustainable Plant Protection
Taxid 2371
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJZW00000000.1