Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
NCBI Strain Identifiers CO2-160
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000254135.2)
Genome Characteristics
CheckM Completeness 99.44%
CheckM Contamination 1.22%
CheckM Strain Heterogeneity 93.33
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 3
N50 Contigs 1,191,773 bp
Longest Contig 1,191,773 bp
Scaffold Count 2
N50 Scaffolds 1,683,224 bp
Longest Scaffold 1,683,224 bp
Genome Size 1,727,452 bp
Protein Count 1,768
Coding Density 93.01%
GC Percentage 31.34%
Ambiguous Bases N/A
GTDB representative GCA_000254135.2
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM141761v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04202592
Country USA: Tulsa
Date 2015-10-28
Genbank Assembly Accession GCA_001417615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source beef liver
Latitude Longitude 36.1314 N 95.9372 W
Molecule Count 2
CDS Count 1,721
Refseq Category na
Seq Rel Date 2015/10/28
Spanned Gaps 1
Species Taxid 195
SSU Count 3
Submitter University of Tulsa
Taxid 195
Total Gap Length 27
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None