Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
NCBI Strain Identifiers CVM N39665
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000254135.2)
Genome Characteristics
CheckM Completeness 99.15%
CheckM Contamination 0.94%
CheckM Strain Heterogeneity 20.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 146
N50 Contigs 110,493 bp
Longest Contig 203,951 bp
Scaffold Count 146
N50 Scaffolds 110,493 bp
Longest Scaffold 203,951 bp
Genome Size 1,736,319 bp
Protein Count 1,880
Coding Density 93.58%
GC Percentage 31.35%
Ambiguous Bases N/A
GTDB representative GCA_000254135.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM141702v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03344543
Country USA
Date 2015-10-27
Genbank Assembly Accession GCA_001417025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Chicken Breast
Latitude Longitude None
Molecule Count N/A
CDS Count 1,833
Refseq Category na
Seq Rel Date 2015/10/27
Spanned Gaps 0
Species Taxid 195
SSU Count 1
Submitter FDA
Taxid 195
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LBEV00000000.1