Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
NCBI Strain Identifiers CVM N46876
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000254135.2)
Genome Characteristics
CheckM Completeness 99.44%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 50.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 84
N50 Contigs 132,893 bp
Longest Contig 402,128 bp
Scaffold Count 84
N50 Scaffolds 132,893 bp
Longest Scaffold 402,128 bp
Genome Size 1,842,702 bp
Protein Count 1,965
Coding Density 92.98%
GC Percentage 31.14%
Ambiguous Bases N/A
GTDB representative GCA_000254135.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM141676v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03344555
Country USA
Date 2015-10-27
Genbank Assembly Accession GCA_001416765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Chicken Breast
Latitude Longitude None
Molecule Count N/A
CDS Count 1,934
Refseq Category na
Seq Rel Date 2015/10/27
Spanned Gaps 0
Species Taxid 195
SSU Count 1
Submitter FDA
Taxid 195
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LBEJ00000000.1