Mycobacterium sp001667275
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp001667275
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium sp. UM_3
NCBI Strain Identifiers UM_3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001667275.1)
Genome Characteristics
CheckM Completeness 99.58%
CheckM Contamination 0.67%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 329
N50 Contigs 35,316 bp
Longest Contig 138,823 bp
Scaffold Count 329
N50 Scaffolds 35,316 bp
Longest Scaffold 138,823 bp
Genome Size 5,226,159 bp
Protein Count 5,123
Coding Density 92.66%
GC Percentage 68.86%
Ambiguous Bases N/A
GTDB representative GCA_001667275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM141409v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03458309
Country Malaysia
Date 2015-10-26
Genbank Assembly Accession GCA_001414095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 3.1333 N 101.7000 E
Molecule Count N/A
CDS Count 5,076
Refseq Category na
Seq Rel Date 2015/10/26
Spanned Gaps 0
Species Taxid 1638774
SSU Count 1
Submitter Universiti Malaya
Taxid 1638774
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LATB00000000.1