Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers CC169
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 8
23S Count 7
tRNA Count 20
Contig Count 29
N50 Contigs 171,565 bp
Longest Contig 659,838 bp
Scaffold Count 29
N50 Scaffolds 171,565 bp
Longest Scaffold 659,838 bp
Genome Size 2,812,068 bp
Protein Count 2,622
Coding Density 83.66%
GC Percentage 32.76%
Ambiguous Bases 57
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM141168v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03988862
Country Brazil: Niteroi
Date 2015-10-23
Genbank Assembly Accession GCA_001411685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nares
Latitude Longitude 22.896559 S 43.119581 W
Molecule Count 2
CDS Count 2,855
Refseq Category na
Seq Rel Date 2015/10/23
Spanned Gaps 0
Species Taxid 1280
SSU Count 7
Submitter Santa Clara University
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LIGU00000000.1