Jannaschia seosinensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Jannaschia; s__Jannaschia seosinensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Jannaschia; s__Jannaschia seosinensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Jannaschia; s__Jannaschia seosinensis
NCBI Strain Identifiers CECT 7799
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 91.49%
CheckM Contamination 0.45%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 253
N50 Contigs 40,004 bp
Longest Contig 128,552 bp
Scaffold Count 253
N50 Scaffolds 40,004 bp
Longest Scaffold 128,552 bp
Genome Size 3,833,324 bp
Protein Count 4,013
Coding Density 87.76%
GC Percentage 65.29%
Ambiguous Bases 87
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name J.seosinensisCECT7799_CISA_Prokka
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3517096
Country None
Date 2015-10-15
Genbank Assembly Accession GCA_001408515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source hypersaline water of solar saltern Seosin; Korea
Latitude Longitude None
Molecule Count N/A
CDS Count 3,862
Refseq Category representative genome
Seq Rel Date 2015/10/15
Spanned Gaps 0
Species Taxid 313367
SSU Count 1
Submitter UVEG
Taxid 313367
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CYPR00000000.1