Phaeobacter italicus
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Phaeobacter; s__Phaeobacter italicus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Phaeobacter; s__Phaeobacter italicus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Phaeobacter; s__Phaeobacter italicus
NCBI Strain Identifiers CECT 7645
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001258055.1)
Genome Characteristics
CheckM Completeness 99.77%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 37
N50 Contigs 291,887 bp
Longest Contig 953,738 bp
Scaffold Count 37
N50 Scaffolds 291,887 bp
Longest Scaffold 953,738 bp
Genome Size 4,049,567 bp
Protein Count 3,809
Coding Density 89.41%
GC Percentage 59.95%
Ambiguous Bases N/A
GTDB representative GCA_001258055.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name N.italicaCECT7645_SPADES
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3393043
Country None
Date 2015-07-25
Genbank Assembly Accession GCA_001404195.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stainless steel cathode exposed to natural seawater
Latitude Longitude None
Molecule Count N/A
CDS Count 3,782
Refseq Category na
Seq Rel Date 2015/07/25
Spanned Gaps 0
Species Taxid 481446
SSU Count 1
Submitter UVEG
Taxid 481446
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CVQZ00000000.1