Chlamydophila psittaci
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota_A; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydophila; s__Chlamydophila psittaci
Filtered NCBI Taxonomy d__Bacteria; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia psittaci
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; x__Chlamydia/Chlamydophila group; g__Chlamydia; s__Chlamydia psittaci; x__Chlamydia psittaci str. Frances
NCBI Strain Identifiers Frances
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000204255.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 13
N50 Contigs 919,847 bp
Longest Contig 919,847 bp
Scaffold Count 3
N50 Scaffolds 1,159,687 bp
Longest Scaffold 1,159,687 bp
Genome Size 1,169,673 bp
Protein Count 1,007
Coding Density 90.34%
GC Percentage 39.00%
Ambiguous Bases 26
GTDB representative GCA_000204255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM140148v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04201206
Country None
Date 2015-10-21
Genbank Assembly Accession GCA_001401485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 993
Refseq Category na
Seq Rel Date 2015/10/21
Spanned Gaps 10
Species Taxid 83554
SSU Count 1
Submitter CDC
Taxid 1050220
Total Gap Length 238
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AFVM00000000.1