Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter fetus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter fetus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter fetus; sb__Campylobacter fetus subsp. fetus
NCBI Strain Identifiers H1-UY
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001816265.1)
Genome Characteristics
CheckM Completeness 99.69%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 34
N50 Contigs 117,911 bp
Longest Contig 236,643 bp
Scaffold Count 34
N50 Scaffolds 117,911 bp
Longest Scaffold 236,643 bp
Genome Size 1,744,879 bp
Protein Count 1,747
Coding Density 92.91%
GC Percentage 33.24%
Ambiguous Bases N/A
GTDB representative GCA_001816265.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM139995v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03333108
Country Uruguay
Date 2015-10-20
Genbank Assembly Accession GCA_001399955.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude 33 S 56 W
Molecule Count N/A
CDS Count 1,720
Refseq Category na
Seq Rel Date 2015/10/20
Spanned Gaps 0
Species Taxid 196
SSU Count 1
Submitter Institut Pasteur Montevideo
Taxid 32019
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYCP00000000.1