Listeria monocytogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers LM156
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187225.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 35
N50 Contigs 210,881 bp
Longest Contig 522,907 bp
Scaffold Count 35
N50 Scaffolds 210,881 bp
Longest Scaffold 522,907 bp
Genome Size 2,969,547 bp
Protein Count 2,919
Coding Density 89.98%
GC Percentage 37.78%
Ambiguous Bases N/A
GTDB representative GCA_900187225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM139989v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03968471
Country Denmark
Date 2015-10-19
Genbank Assembly Accession GCA_001399895.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Food
Latitude Longitude None
Molecule Count N/A
CDS Count 2,971
Refseq Category na
Seq Rel Date 2015/10/19
Spanned Gaps 0
Species Taxid 1639
SSU Count 2
Submitter University of Copenhagen
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LIKV00000000.1