Streptococcus agalactiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers Mother11
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 73
N50 Contigs 84,596 bp
Longest Contig 244,050 bp
Scaffold Count 73
N50 Scaffolds 84,596 bp
Longest Scaffold 244,050 bp
Genome Size 2,122,955 bp
Protein Count 2,144
Coding Density 89.25%
GC Percentage 35.41%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Mother11
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2780165
Country France
Date 2014-11-4
Genbank Assembly Accession GCA_001398915.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vaginal fluid
Latitude Longitude None
Molecule Count N/A
CDS Count 2,179
Refseq Category na
Seq Rel Date 2014/11/04
Spanned Gaps 0
Species Taxid 1311
SSU Count 1
Submitter INSTITUT PASTEUR
Taxid 1311
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CDCM00000000.1