Streptococcus agalactiae
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers Mother5-2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 77
N50 Contigs 86,975 bp
Longest Contig 243,568 bp
Scaffold Count 77
N50 Scaffolds 86,975 bp
Longest Scaffold 243,568 bp
Genome Size 1,972,042 bp
Protein Count 1,960
Coding Density 89.15%
GC Percentage 35.29%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Mother5-2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2780150
Country France
Date 2014-11-4
Genbank Assembly Accession GCA_001398615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Milk
Latitude Longitude None
Molecule Count N/A
CDS Count 1,992
Refseq Category na
Seq Rel Date 2014/11/04
Spanned Gaps 0
Species Taxid 1311
SSU Count 1
Submitter INSTITUT PASTEUR
Taxid 1311
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CDCC00000000.1