Chlamydia trachomatis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota_A; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia trachomatis
Filtered NCBI Taxonomy d__Bacteria; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia trachomatis
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; x__Chlamydia/Chlamydophila group; g__Chlamydia; s__Chlamydia trachomatis
NCBI Strain Identifiers R27091extract
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000012125.1)
Genome Characteristics
CheckM Completeness 98.92%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 17
N50 Contigs 802,446 bp
Longest Contig 802,446 bp
Scaffold Count 13
N50 Scaffolds 802,446 bp
Longest Scaffold 802,446 bp
Genome Size 1,061,530 bp
Protein Count 925
Coding Density 89.41%
GC Percentage 41.17%
Ambiguous Bases N/A
GTDB representative GCA_000012125.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 7501_6#52
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1398254
Country Russia: St Petersburg
Date 2015-4-24
Genbank Assembly Accession GCA_001398135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source cervical
Latitude Longitude None
Molecule Count N/A
CDS Count 953
Refseq Category na
Seq Rel Date 2015/04/24
Spanned Gaps 4
Species Taxid 813
SSU Count 1
Submitter SC
Taxid 813
Total Gap Length 616
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CVNT00000000.1