Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers 15% 7
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 75
N50 Contigs 211,085 bp
Longest Contig 770,982 bp
Scaffold Count 75
N50 Scaffolds 211,085 bp
Longest Scaffold 770,982 bp
Genome Size 6,491,315 bp
Protein Count 5,942
Coding Density 89.43%
GC Percentage 66.31%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 266_15Pc_7_contigs_500
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3296565
Country None
Date 2015-4-20
Genbank Assembly Accession GCA_001375115.1
Genome Category Isolate
Genome Representation full
Isolate 15% 7
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,130
Refseq Category na
Seq Rel Date 2015/04/20
Spanned Gaps 0
Species Taxid 287
SSU Count 1
Submitter CARDIFF UNIVERSITY
Taxid 287
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CTEU00000000.1