Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers 15.321Ga
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.56%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 86
N50 Contigs 264,882 bp
Longest Contig 847,683 bp
Scaffold Count 86
N50 Scaffolds 264,882 bp
Longest Scaffold 847,683 bp
Genome Size 6,681,108 bp
Protein Count 6,218
Coding Density 89.66%
GC Percentage 66.25%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 292_15_321Ga_contigs_500
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3296141
Country None
Date 2015-4-20
Genbank Assembly Accession GCA_001374315.1
Genome Category Isolate
Genome Representation full
Isolate 15.321Ga
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,386
Refseq Category na
Seq Rel Date 2015/04/20
Spanned Gaps 0
Species Taxid 287
SSU Count 1
Submitter CARDIFF UNIVERSITY
Taxid 287
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CUYE00000000.1