Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers 15.111a
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 2.43%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 201
N50 Contigs 134,144 bp
Longest Contig 606,095 bp
Scaffold Count 201
N50 Scaffolds 134,144 bp
Longest Scaffold 606,095 bp
Genome Size 7,540,785 bp
Protein Count 7,196
Coding Density 88.63%
GC Percentage 65.20%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 278_15_111A_contigs_500
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3296128
Country None
Date 2015-4-20
Genbank Assembly Accession GCA_001374055.1
Genome Category Isolate
Genome Representation full
Isolate 15.111a
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 7,394
Refseq Category na
Seq Rel Date 2015/04/20
Spanned Gaps 0
Species Taxid 287
SSU Count 1
Submitter CARDIFF UNIVERSITY
Taxid 287
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CUXV00000000.1