Undefined name (Failed Quality Check)
Isolate LQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy Undefined (Failed Quality Check)
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
NCBI Strain Identifiers 4g8B
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 96.0%
CheckM Contamination 11.38%
CheckM Strain Heterogeneity 84.48
5S Count 4
16S Count 6
23S Count 8
tRNA Count 19
Contig Count 1,402
N50 Contigs 5,271 bp
Longest Contig 36,451 bp
Scaffold Count 1,402
N50 Scaffolds 5,271 bp
Longest Scaffold 36,451 bp
Genome Size 4,599,101 bp
Protein Count 4,406
Coding Density 91.91%
GC Percentage 44.89%
Ambiguous Bases 540
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 4g8B_assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3217991
Country None
Date 2015-4-3
Genbank Assembly Accession GCA_001373095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,507
Refseq Category na
Seq Rel Date 2015/04/03
Spanned Gaps 0
Species Taxid 817
SSU Count 3
Submitter CGS-GL
Taxid 817
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CDQP00000000.1