Paeniclostridium sordellii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Peptostreptococcales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
NCBI Strain Identifiers SSCC35109
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000953675.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.63%
CheckM Strain Heterogeneity 0.0
5S Count 15
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 36
N50 Contigs 1,789,940 bp
Longest Contig 1,789,940 bp
Scaffold Count 36
N50 Scaffolds 1,789,940 bp
Longest Scaffold 1,789,940 bp
Genome Size 3,552,675 bp
Protein Count 3,526
Coding Density 86.60%
GC Percentage 27.31%
Ambiguous Bases 3
GTDB representative GCA_000953675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SSCC35109
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1572094
Country Australia
Date 2015-4-20
Genbank Assembly Accession GCA_001372875.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Blood culture
Latitude Longitude None
Molecule Count N/A
CDS Count 3,417
Refseq Category na
Seq Rel Date 2015/04/20
Spanned Gaps 0
Species Taxid 1505
SSU Count 2
Submitter SC
Taxid 1505
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CDNF00000000.1