Paeniclostridium sordellii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Peptostreptococcales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
NCBI Strain Identifiers SSCC26591
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000953675.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.7%
CheckM Strain Heterogeneity 0.0
5S Count 15
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 35
N50 Contigs 542,364 bp
Longest Contig 972,009 bp
Scaffold Count 35
N50 Scaffolds 542,364 bp
Longest Scaffold 972,009 bp
Genome Size 3,521,765 bp
Protein Count 3,422
Coding Density 87.15%
GC Percentage 27.31%
Ambiguous Bases 2
GTDB representative GCA_000953675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SSCC26591
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1572083
Country Australia
Date 2015-4-20
Genbank Assembly Accession GCA_001372795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Blood culture
Latitude Longitude None
Molecule Count N/A
CDS Count 3,352
Refseq Category na
Seq Rel Date 2015/04/20
Spanned Gaps 0
Species Taxid 1505
SSU Count 8
Submitter SC
Taxid 1505
Total Gap Length 0
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CDNX00000000.1