Paeniclostridium sordellii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Peptostreptococcales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
NCBI Strain Identifiers JGS6961
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000953675.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.63%
CheckM Strain Heterogeneity 0.0
5S Count 15
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 27
N50 Contigs 1,950,252 bp
Longest Contig 1,950,252 bp
Scaffold Count 27
N50 Scaffolds 1,950,252 bp
Longest Scaffold 1,950,252 bp
Genome Size 3,545,060 bp
Protein Count 3,483
Coding Density 86.56%
GC Percentage 27.32%
Ambiguous Bases 2
GTDB representative GCA_000953675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name JGS6961
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1572114
Country USA
Date 2015-4-20
Genbank Assembly Accession GCA_001372715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,394
Refseq Category na
Seq Rel Date 2015/04/20
Spanned Gaps 0
Species Taxid 1505
SSU Count 4
Submitter SC
Taxid 1505
Total Gap Length 0
Translation Table 11
tRNA Count (total) 106
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CDNI00000000.1