Paeniclostridium sordellii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Peptostreptococcales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Peptostreptococcaceae; g__Paeniclostridium; s__Paeniclostridium sordellii
NCBI Strain Identifiers R30684
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000953675.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.7%
CheckM Strain Heterogeneity 0.0
5S Count 14
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 28
N50 Contigs 1,954,703 bp
Longest Contig 1,954,703 bp
Scaffold Count 28
N50 Scaffolds 1,954,703 bp
Longest Scaffold 1,954,703 bp
Genome Size 3,536,120 bp
Protein Count 3,466
Coding Density 87.40%
GC Percentage 27.36%
Ambiguous Bases 1
GTDB representative GCA_000953675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name R30684
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1572107
Country United Kingdom
Date 2015-4-20
Genbank Assembly Accession GCA_001372375.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Calf
Latitude Longitude None
Molecule Count N/A
CDS Count 3,376
Refseq Category na
Seq Rel Date 2015/04/20
Spanned Gaps 0
Species Taxid 1505
SSU Count 2
Submitter SC
Taxid 1505
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CELE00000000.1