Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhi
NCBI Strain Identifiers 2011-015914
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.07%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 54
N50 Contigs 206,310 bp
Longest Contig 546,070 bp
Scaffold Count 52
N50 Scaffolds 206,310 bp
Longest Scaffold 546,070 bp
Genome Size 4,932,779 bp
Protein Count 4,815
Coding Density 87.08%
GC Percentage 51.84%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 10607_1#73
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2146042
Country Cambodia
Date 2015-4-22
Genbank Assembly Accession GCA_001363435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Not known
Latitude Longitude None
Molecule Count N/A
CDS Count 5,067
Refseq Category na
Seq Rel Date 2015/04/22
Spanned Gaps 2
Species Taxid 28901
SSU Count 2
Submitter SC
Taxid 90370
Total Gap Length 37
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CGPN00000000.1