Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhi
NCBI Strain Identifiers 107123
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 44
N50 Contigs 204,713 bp
Longest Contig 670,584 bp
Scaffold Count 43
N50 Scaffolds 204,713 bp
Longest Scaffold 670,584 bp
Genome Size 4,706,739 bp
Protein Count 4,562
Coding Density 87.24%
GC Percentage 52.03%
Ambiguous Bases 3
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 10060_5#61
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2056817
Country Fiji
Date 2015-4-22
Genbank Assembly Accession GCA_001360095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,817
Refseq Category na
Seq Rel Date 2015/04/22
Spanned Gaps 1
Species Taxid 28901
SSU Count 3
Submitter SC
Taxid 90370
Total Gap Length 20
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CGJB00000000.1