Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhi
NCBI Strain Identifiers 1016889
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 1
N50 Contigs 4,807,786 bp
Longest Contig 4,807,786 bp
Scaffold Count 1
N50 Scaffolds 4,807,786 bp
Longest Scaffold 4,807,786 bp
Genome Size 4,807,786 bp
Protein Count 4,655
Coding Density 86.78%
GC Percentage 52.08%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name 1016889
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1903846
Country Malawi
Date 2017-8-4
Genbank Assembly Accession GCA_001356455.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Not known
Latitude Longitude None
Molecule Count 1
CDS Count 4,901
Refseq Category na
Seq Rel Date 2017/08/04
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter SC
Taxid 90370
Total Gap Length 0
Translation Table 11
tRNA Count (total) 79
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None