Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhi
NCBI Strain Identifiers Ke468
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.71%
CheckM Contamination 0.07%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 58
N50 Contigs 206,427 bp
Longest Contig 575,935 bp
Scaffold Count 57
N50 Scaffolds 206,427 bp
Longest Scaffold 575,935 bp
Genome Size 4,937,209 bp
Protein Count 4,828
Coding Density 87.05%
GC Percentage 51.83%
Ambiguous Bases 3
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 8525_3#47
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1572048
Country Kenya
Date 2015-4-22
Genbank Assembly Accession GCA_001355555.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Not known
Latitude Longitude None
Molecule Count N/A
CDS Count 5,054
Refseq Category na
Seq Rel Date 2015/04/22
Spanned Gaps 1
Species Taxid 28901
SSU Count 2
Submitter SC
Taxid 90370
Total Gap Length 50
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CGSC00000000.1