Yersinia enterocolitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers IP26249
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 99.95%
CheckM Contamination 0.05%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 104
N50 Contigs 119,230 bp
Longest Contig 368,511 bp
Scaffold Count 104
N50 Scaffolds 119,230 bp
Longest Scaffold 368,511 bp
Genome Size 4,563,803 bp
Protein Count 4,204
Coding Density 85.34%
GC Percentage 46.96%
Ambiguous Bases 7
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 8016_2#65
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1486332
Country France
Date 2015-4-3
Genbank Assembly Accession GCA_001354575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source faeces
Latitude Longitude None
Molecule Count N/A
CDS Count 4,261
Refseq Category na
Seq Rel Date 2015/04/03
Spanned Gaps 0
Species Taxid 630
SSU Count 2
Submitter SC
Taxid 630
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CGBR00000000.1