Yersinia enterocolitica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers IP26042
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.05%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 160
N50 Contigs 68,151 bp
Longest Contig 289,487 bp
Scaffold Count 159
N50 Scaffolds 68,151 bp
Longest Scaffold 289,487 bp
Genome Size 4,690,663 bp
Protein Count 4,527
Coding Density 84.75%
GC Percentage 46.77%
Ambiguous Bases 4
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 8016_2#81
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1486282
Country France
Date 2015-4-3
Genbank Assembly Accession GCA_001354555.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,440
Refseq Category na
Seq Rel Date 2015/04/03
Spanned Gaps 1
Species Taxid 630
SSU Count 1
Submitter SC
Taxid 630
Total Gap Length 79
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CGGL00000000.1