Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers FL380
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 88
N50 Contigs 87,688 bp
Longest Contig 345,073 bp
Scaffold Count 84
N50 Scaffolds 87,688 bp
Longest Scaffold 345,073 bp
Genome Size 2,910,339 bp
Protein Count 2,786
Coding Density 84.12%
GC Percentage 32.58%
Ambiguous Bases 12
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 9235_1#5
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1710098
Country USA: New York; Inwood
Date 2015-4-1
Genbank Assembly Accession GCA_001354395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nasal
Latitude Longitude None
Molecule Count N/A
CDS Count 3,065
Refseq Category na
Seq Rel Date 2015/04/01
Spanned Gaps 4
Species Taxid 1280
SSU Count 4
Submitter SC
Taxid 1280
Total Gap Length 99
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CFPJ00000000.1