Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers USFL177
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 38
N50 Contigs 287,464 bp
Longest Contig 898,595 bp
Scaffold Count 37
N50 Scaffolds 287,464 bp
Longest Scaffold 898,595 bp
Genome Size 2,917,235 bp
Protein Count 2,763
Coding Density 84.04%
GC Percentage 32.65%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 7907_4#85
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1466520
Country USA: New York; Morrisania
Date 2015-4-1
Genbank Assembly Accession GCA_001354075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nasal
Latitude Longitude None
Molecule Count N/A
CDS Count 3,045
Refseq Category na
Seq Rel Date 2015/04/01
Spanned Gaps 1
Species Taxid 1280
SSU Count 4
Submitter SC
Taxid 1280
Total Gap Length 47
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CFQK00000000.1