Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers USFL215
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 40
N50 Contigs 300,902 bp
Longest Contig 895,076 bp
Scaffold Count 40
N50 Scaffolds 300,902 bp
Longest Scaffold 895,076 bp
Genome Size 2,922,833 bp
Protein Count 2,770
Coding Density 83.96%
GC Percentage 32.65%
Ambiguous Bases 1
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 7738_3#28
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1324740
Country USA: New York; Inwood
Date 2015-4-1
Genbank Assembly Accession GCA_001353135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soft tissue
Latitude Longitude None
Molecule Count N/A
CDS Count 3,053
Refseq Category na
Seq Rel Date 2015/04/01
Spanned Gaps 0
Species Taxid 1280
SSU Count 4
Submitter SC
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CFQI00000000.1