Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers USFL299
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 29
N50 Contigs 346,377 bp
Longest Contig 895,078 bp
Scaffold Count 29
N50 Scaffolds 346,377 bp
Longest Scaffold 895,078 bp
Genome Size 2,880,304 bp
Protein Count 2,697
Coding Density 83.83%
GC Percentage 32.62%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 7738_4#17
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1324715
Country USA: New York; BronxPark
Date 2015-4-22
Genbank Assembly Accession GCA_001352935.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source household surface
Latitude Longitude None
Molecule Count N/A
CDS Count 2,986
Refseq Category na
Seq Rel Date 2015/04/22
Spanned Gaps 0
Species Taxid 1280
SSU Count 4
Submitter SC
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CIAG00000000.1