Streptococcus agalactiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers DK-NI-012
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 19
N50 Contigs 163,559 bp
Longest Contig 461,558 bp
Scaffold Count 16
N50 Scaffolds 296,797 bp
Longest Scaffold 461,558 bp
Genome Size 2,051,490 bp
Protein Count 2,013
Coding Density 89.03%
GC Percentage 35.32%
Ambiguous Bases 1
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 6630_5#15
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1031455
Country Denmark
Date 2015-4-3
Genbank Assembly Accession GCA_001348775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 2,068
Refseq Category na
Seq Rel Date 2015/04/03
Spanned Gaps 3
Species Taxid 1311
SSU Count 1
Submitter SC
Taxid 1311
Total Gap Length 67
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CGCD00000000.1