Streptococcus agalactiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers DK-NI-015
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 30
N50 Contigs 92,069 bp
Longest Contig 265,639 bp
Scaffold Count 21
N50 Scaffolds 146,153 bp
Longest Scaffold 321,863 bp
Genome Size 2,053,782 bp
Protein Count 2,043
Coding Density 88.85%
GC Percentage 35.23%
Ambiguous Bases 1
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 6630_5#18
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1031435
Country Denmark
Date 2015-4-22
Genbank Assembly Accession GCA_001348675.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 2,072
Refseq Category na
Seq Rel Date 2015/04/22
Spanned Gaps 9
Species Taxid 1311
SSU Count 1
Submitter SC
Taxid 1311
Total Gap Length 218
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CHYR00000000.1