GCF_001338275.1
Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 99.6%
CheckM Contamination 0.28%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 61
N50 Contigs 64,264 bp
Longest Contig 204,961 bp
Scaffold Count 61
N50 Scaffolds 64,264 bp
Longest Scaffold 204,961 bp
Genome Size 2,101,930 bp
Protein Count 2,110
Coding Density 86.21%
GC Percentage 39.49%
Ambiguous Bases 6
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 6680_6#20
Assembly Type na
Bioproject PRJNA224116
Biosample SAMEA1024774
Country Thailand: Maela
Date 2015-04-22
Genbank Assembly Accession GCA_001338275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nasopharynx
Latitude Longitude None
Molecule Count N/A
CDS Count 2,256
Refseq Category na
Seq Rel Date 2015/04/22
Spanned Gaps 0
Species Taxid 1313
SSU Count 1
Submitter SC
Taxid 1313
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CHPM00000000.1