GCF_001333075.1
Bordetella pertussis
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 98.68%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 793
N50 Contigs 8,343 bp
Longest Contig 52,629 bp
Scaffold Count 742
N50 Scaffolds 8,542 bp
Longest Scaffold 52,629 bp
Genome Size 3,752,059 bp
Protein Count 4,024
Coding Density 89.48%
GC Percentage 67.75%
Ambiguous Bases 5
GTDB representative GCA_000306945.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 5515_6#3
Assembly Type na
Bioproject PRJNA224116
Biosample SAMEA751449
Country Italy
Date 2015-07-23
Genbank Assembly Accession GCA_001333075.1
Genome Category Isolate
Genome Representation full
Isolate 13612
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 3,931
Refseq Category na
Seq Rel Date 2015/07/23
Spanned Gaps 51
Species Taxid 520
SSU Count 1
Submitter SC
Taxid 520
Total Gap Length 7646
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CFWM00000000.1