GCF_001329555.1
Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 99.18%
CheckM Contamination 2.07%
CheckM Strain Heterogeneity 68.75
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 445
N50 Contigs 14,833 bp
Longest Contig 86,950 bp
Scaffold Count 438
N50 Scaffolds 15,488 bp
Longest Scaffold 86,950 bp
Genome Size 2,200,736 bp
Protein Count 2,454
Coding Density 86.38%
GC Percentage 39.46%
Ambiguous Bases 7
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 6246_2#17
Assembly Type na
Bioproject PRJNA224116
Biosample SAMEA1020841
Country USA: Tennessee
Date 2015-07-24
Genbank Assembly Accession GCA_001329555.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 2,584
Refseq Category na
Seq Rel Date 2015/07/24
Spanned Gaps 7
Species Taxid 1313
SSU Count 2
Submitter SC
Taxid 1313
Total Gap Length 707
Translation Table 11
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CHCU00000000.1