Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
NCBI Strain Identifiers SN27474
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457635.1)
Genome Characteristics
CheckM Completeness 92.4%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 266
N50 Contigs 13,632 bp
Longest Contig 38,607 bp
Scaffold Count 128
N50 Scaffolds 36,389 bp
Longest Scaffold 130,248 bp
Genome Size 2,034,411 bp
Protein Count 1,964
Coding Density 80.44%
GC Percentage 39.68%
Ambiguous Bases N/A
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 6289_8#8
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1020187
Country None
Date 2015-4-16
Genbank Assembly Accession GCA_001329115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 2,233
Refseq Category na
Seq Rel Date 2015/04/16
Spanned Gaps 138
Species Taxid 1313
SSU Count 1
Submitter SC
Taxid 1313
Total Gap Length 38130
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CVMS00000000.1