GCF_001329055.1
Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 99.42%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 75
N50 Contigs 57,470 bp
Longest Contig 150,639 bp
Scaffold Count 73
N50 Scaffolds 57,470 bp
Longest Scaffold 150,639 bp
Genome Size 2,059,829 bp
Protein Count 2,038
Coding Density 85.84%
GC Percentage 39.65%
Ambiguous Bases 10
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 6187_4#17
Assembly Type na
Bioproject PRJNA224116
Biosample SAMEA1020145
Country China: Shanghai
Date 2015-04-03
Genbank Assembly Accession GCA_001329055.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 2,164
Refseq Category na
Seq Rel Date 2015/04/03
Spanned Gaps 2
Species Taxid 1313
SSU Count 1
Submitter SC
Taxid 1313
Total Gap Length 64
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CGAU00000000.1