GCF_001326835.1
Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 99.82%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 58
N50 Contigs 67,251 bp
Longest Contig 159,533 bp
Scaffold Count 56
N50 Scaffolds 67,251 bp
Longest Scaffold 159,533 bp
Genome Size 1,981,215 bp
Protein Count 1,988
Coding Density 86.22%
GC Percentage 39.76%
Ambiguous Bases 1
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 5242_8#3
Assembly Type na
Bioproject PRJNA224116
Biosample SAMEA970291
Country Czech Republic
Date 2015-04-01
Genbank Assembly Accession GCA_001326835.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source CSF
Latitude Longitude None
Molecule Count N/A
CDS Count 2,095
Refseq Category na
Seq Rel Date 2015/04/01
Spanned Gaps 2
Species Taxid 1313
SSU Count 1
Submitter SC
Taxid 1313
Total Gap Length 24
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CFOD00000000.1