Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhimurium; x__Salmonella enterica subsp. enterica serovar Typhimurium str. DT104
NCBI Strain Identifiers EWH11
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 2
23S Count 3
tRNA Count 18
Contig Count 84
N50 Contigs 196,445 bp
Longest Contig 576,025 bp
Scaffold Count 80
N50 Scaffolds 196,445 bp
Longest Scaffold 576,025 bp
Genome Size 4,986,289 bp
Protein Count 4,789
Coding Density 87.55%
GC Percentage 52.11%
Ambiguous Bases 21
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 9066_1#2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1707617
Country United Kingdom:England
Date 2015-04-06
Genbank Assembly Accession GCA_001326235.1
Genome Category Isolate
Genome Representation full
Isolate EWH11
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 5,152
Refseq Category na
Seq Rel Date 2015/04/06
Spanned Gaps 4
Species Taxid 28901
SSU Count 1
Submitter SC
Taxid 85569
Total Gap Length 84
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CVKK00000000.1