Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhimurium; x__Salmonella enterica subsp. enterica serovar Typhimurium str. DT104
NCBI Strain Identifiers EWH4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 70
N50 Contigs 204,685 bp
Longest Contig 364,136 bp
Scaffold Count 63
N50 Scaffolds 204,685 bp
Longest Scaffold 576,530 bp
Genome Size 5,007,749 bp
Protein Count 4,811
Coding Density 87.58%
GC Percentage 52.07%
Ambiguous Bases 11
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 9065_1#5
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1707616
Country United Kingdom:England
Date 2015-4-6
Genbank Assembly Accession GCA_001326215.1
Genome Category Isolate
Genome Representation full
Isolate EWH4
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 5,123
Refseq Category na
Seq Rel Date 2015/04/06
Spanned Gaps 7
Species Taxid 28901
SSU Count 3
Submitter SC
Taxid 85569
Total Gap Length 320
Translation Table 11
tRNA Count (total) 76
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CVKA00000000.1