Burkholderia mallei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia mallei
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia pseudomallei
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__pseudomallei group; s__Burkholderia pseudomallei
NCBI Strain Identifiers C39
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000011705.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 83
N50 Contigs 186,089 bp
Longest Contig 585,833 bp
Scaffold Count 69
N50 Scaffolds 271,533 bp
Longest Scaffold 585,833 bp
Genome Size 7,091,771 bp
Protein Count 5,858
Coding Density 84.11%
GC Percentage 68.22%
Ambiguous Bases 9
GTDB representative GCA_000011705.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 7909_4#6
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA807047
Country Thailand
Date 2015-4-2
Genbank Assembly Accession GCA_001321505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urine
Latitude Longitude None
Molecule Count N/A
CDS Count 7,280
Refseq Category na
Seq Rel Date 2015/04/02
Spanned Gaps 14
Species Taxid 28450
SSU Count 1
Submitter SC
Taxid 28450
Total Gap Length 829
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CFYP00000000.1